Cancer Imaging Phenomics Toolkit (CaPTk)

Supported Image Types and Modalities

CaPTk always assumes the multi-modal data is coregistered and skull-stripped (in case of brains). This constraint will be removed in a future release.

Currently, CaPTk supports NIfTI (extensions .nii.gz, .nii) and DICOM (extension .dcm) images with the following types of MRI modalities:

  1. T1
  2. T2
  3. T1CE or T1-Gd
  4. FLAIR
  5. Perfusion (we assume DSC-MRI as Perfusion for simplicity)
  6. DTI (non-visualization)