Cancer Imaging Phenomics Toolkit (CaPTk)  1.6.0
Segmentation

Currently there are two ways to produce segmentation labels for various structures in the images that are loaded:

  1. using the Geodesic Distance Transform
  2. using ITK-SNAP
  3. using DeepMedic (BraTS data trained)
applicationsSeg_resize.png
Segmentation applications
More information on how to run those is provided in the corresponding How-To section.